Chapters


Carney, P., Cadotte, A., DeMarse, T., Vemuri, B., T. Mareci, T., & Ditto, W. (2008). Functional and Anatomical Connectivity in the Rat Model of Spontaneous Limbic Seizures. In Schulze-Bonhage, Timmer, & Schelter Eds. Seizure Prediction in Epilepsy: From Basic Mechanisms to Clinical Applications. Wiley-VCH Verlog, Weinheim, Germany.

Potter, S. M., Wagenaar, D. A., & DeMarse, T. B. (2006). Closing the Loop: Stimulation Feedback Systems for Embodied MEA Cultures. In Advances in Network Electrophysiology Using Multi-Electrode Arrays, M. Taketani and M. Baudry (Eds.), pp 215-242. [pdf]

Bakkum, D. J., Shkolnik, A. C., Ben-Ary, G., Gamblen, P., DeMarse, T. B
., Potter, S. M (2005). Removing some ‘A’ from AI: Embodied Cultured Networks. In Iida, F., Pfeifer, R., Steels, L., and Kuniyoshi, Y., Eds., Embodied Artificial Intelligence. Springer, New York, 3132, 130-145. [pdf]

Publications


Dockendorf, K.P., Park, I.I., Ping, H., Principe, J.C., DeMarse, T.B. (2009). Liquid State Machines and Cultured Cortical Networks: The Separation Property. Biosystems, 90-97.

Cadotte, A.J., Mareci T., DeMarse, T.B., Parekh, M., Rajagovindan, R., Ditto, W., Talathi, S., Hwang, D., Carney, P. (In Press). Temporal Lobe Epilepsy: Anatomical and Effective Connectivity.
IEEE-Transactions on Neural Systems and Rehabilitation Engineering.

Cadotte, A.J., DeMarse, T.B., Grimes, J.N., Ding, M. (2008).
Causal Measures of structure and plasticity in simulated and living neural networks. PLOS One.

Park, I., Paiva, A., DeMarse, T., Principe, J. (2008).
An Efficient Computation of Continuous-time Correlogram of Spike Trains. Journal of Neuroscience Methods, 168, 514-523,

Scarlatos, A., Cadotte, A., DeMarse, T.B., Welt, B. (2008). Biosensor Uses Cortical Networks on Microelectrode Arrays to Detect Botulism Toxin. Journal of Food Science, 73, 514-523.

Dockendorf, K., & DeMarse, T. (2007).
Amplitude and Spike Timing Dependent Plasticity. Neural Networks: IJCNN Proceedings of International Joint Conference on Neural Networks, 1802-1806.


Elmariah, H., Dockendorf, K., Sadlier, R., and DeMarse, T. (2006). Impedance changes in spontaneously active Aplysia Neural Tissue. IEEE Cairo International Biomedical Engineering Conference (CIBEC).[abstract] [pdf]

Park, I., Xu, D., DeMarse, T. B., and Principe, J. C. (2006).
Modeling of Synchronized Burst in Dissociate Cortical Tissue: An Exploration of Parameter Space. Proceedings of the International Joint Conference on Neural Networks, 581-586. [abstract][pdf]

Goswami, D., Schuch, K., Zheng, Y., DeMarse, T., Principe, J. C. (2006).
Towards the modeling of dissociated cortical tissue in the liquid state machine framework. Proceedings of the International Joint Conference on Neural Networks, 2179-2183. [abstract][pdf].

Mishra, M., Jones, B., Simonotto, J.D., Furman, M.D., Norman, W., Liu, Z., DeMarse, T.B., Carney, P., Ditto, W.L. (2006). Pre-Ictal Correlation and Entropy Analysis of Microwire Data from an Animal Model of Limbic Epilepsy. Proceedings of the 28th IEEE Engineering in Medicine and Biology Society International Conference, 1605-1607.[abstract][pdf].

Nelson, R., Myers, S., Simonotto, J.D., Furman, M.D., Spano, M.L., Norman, W., Liu, Z., DeMarse, T.B., Carney, P., Ditto, W.L. (2006). Detection of High Frequency Oscillations with Teager Energy in an Animal Model of Limbic Epilepsy. Proceedings of the 28th IEEE Engineering in Medicine and Biology Society International Conference,2578-2580. [abstract] [pdf]

Simonotto, J.D., Myers, S., Furman, M.D., Norman, W., Liu, Z., DeMarse, T.B., Carney, P., Ditto, W. L. (2006). Coherence Analysis Over the Latent Period of Epileptogenesis Reveal that High-Frequency Communication is Increased Across Hemispheres in an Animal Model of Limbic Epilepsy. Proceedings of the 28th IEEE Engineering in Medicine and Biology Society International Conference, 1154-1156. [abstract] [pdf]


Cadotte, A. J. & DeMarse, T. B. (2005) Poly-HEMA as a Drug Delivery Device for In Vitro Neural Networks on Micro-Electrode Arrays. Journal of Neural Engineering, 2(4), 114-122. [abstract] [pdf]

Sadleir, R. J., Grant, S. C., DeMarse, T. B., Woo, E. J., Lee, S. Y., Kim, T. S., Oh, S. H.,Zhang, S.U., Lee, B. I., & Seo, J.K. (2005). Study of MRI/MEA compatibility at 17.6 Telsa
. Proceedings of the 5th International conference on Bioelectromagnetish and 5th International symposium on noninvasive functional source imaging within the human brain and heart (BME & NFSI), International Journal of Bioelectromagnetism. 7, 278-281.

DeMarse, T. B., & Dockendorf, K. P. (2005). Adaptive flight control with living neuronal networks on microelectrode arrays. Proceedings of the International Joint Conference on Neural Networks, 3, 1548-1551. (Invited.) [pdf].

Scarlatos, A., Welt, B. A., Cooper, B. Y., Archer, D., DeMarse, T. B., Chau, K.V. (2005). Concise Review: Methods for detecting botulinum toxin with applicability to screening foods against biological terrorist attacks. Journal of Food Science, 70(8), 121-129.

DeMarse, T. B., & Urcuioli, P. J. (2005). Control of matching by differential outcome expectancies in the absence of differential sample-outcome associations: A serial-compound view. Journal of Experimental Psychology: Animal Behavior Processes, 31(4), 449-466.

DeMarse, T. B., Cadotte, A., Douglas, P., He, P., & Trinh, V. (2004). Computation Within Cultured Neural Networks.
Proceedings of the 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.(Invited)

Potter, S. M., DeMarse, T. B., Blau, A. W. Wagenaar, D. A. (2003). "Multi-photon time-lapse microscopy and optical recording to study neural processing and plasticity." Microscopy and Microanalysis 9(2): 184-185.

Potter, S. M., Madhavan, R., DeMarse, T. B., (2003). Long-term bidirectional neuron interfaces for robotic control, and in vitro learning studies.
Proceedings of the 25th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

DeMarse, T. B., Wagenaar, D. A., Blau, A. W., & Potter, S. M. (2001). The neurally controlled animat: Biological brains acting with simulated bodies. Autonomous Robots, 11, 305-310.

Potter, S. M., & DeMarse, T. B (2001). A new approach to neural cell culture for long-term studies
. Journal of Neuroscience Methods, 110, 17-24.

Urcuioli, P. J., DeMarse, T. B
., & Lionello, K. M. (2001). Assessing the contributions of S-O and R-O associations to differential outcome matching through outcome reversals. Journal of Experimental Psychology: Animal Behavior Processes, 27, 239-251.

DeMarse, T. B., Wagenaar, D. A., Blau, A. W., & Potter, S. M. (2000). Interfacing neuronal cultures to a computer generated virtual world.
Proceedings of the 7th Symposium on Neural Computation, University of Southern California, 10, 36-42.

DeMarse, T. B
., & Killeen, P. R., & Baker, D. L. (1999). Satiation, capacity, and within-session responding, Journal of the Experimental Analysis of Behavior, 72,407-423.

Urcuioli, P. J., DeMarse, T. B., & Lionello, K. M. (1999). Sample-duration effect on pigeons' delayed matching as a function of predictability of duration.
Journal of the Experimental Analysis of Behavior, 72, 279-297.

Urcuioli, P. J., DeMarse, T. B., & Lionello, K. M. (1998). Transfer of performance to new comparison choices following differential outcome matching-to-sample.
Animal Learning & Behavior, 26, 139-153.

Urcuioli, P. J., DeMarse, T. B., & Zentall, T. R. (1998). Transfer across delayed discriminations: II. Differences in the substitutability of initial versus test stimuli.
Journal of Experimental Psychology: Animal Behavior Processes, 24, 47-59.

Urcuioli, P. J., & DeMarse, T. B
. (1997). Further tests of response-outcome associations in differential-outcome matching-to-sample. Journal of Experimental Psychology: Animal Behavior Processes, 23, 171-182.

Urcuioli, P. J., & DeMarse, T. B
. (1997). Memory processes in delayed discriminations: Response intentions or response mediation? Journal of the Experimental Analyses of Behavior, 67, 323-336

Urcuioli, P. J., & DeMarse, T. B
. (1996). Associative processes in differential outcome discriminations. Journal of Experimental Psychology: Animal Behavior Processes, 22, 192-204.

Urcuioli, P. J., Zentall, T. R., & DeMarse, T. B
. (1995). Transfer to derived sample-comparison relations by pigeons following many-to-one versus one-to-many matching with identical training relations. Quarterly Journal of Experimental Psychology: Comparative and Physiological Psychology, 48B, 158-178.

Urcuioli, P. J., & DeMarse, T. B. (1994). On the relationship between differential outcomes and differential sample responding in matching-to-sample.
Journal of Experimental Psychology: Animal Behavior Processes, 20, 249-263.

Urcuioli, P. J., DeMarse, T. B
. & Zentall, T. R. (1994). Some properties of many-to-one matching with hue, response, and food samples: Retention and mediated transfer. Learning & Motivation, 25, 175-200.

DeMarse, T. B
. & Urcuioli, P. J. (1993). Enhancement of matching acquisition by differential comparison-outcome associations. Journal of Experimental Psychology: Animal Behavior Processes, 19, 317-326.

Rilling, M., DeMarse, T. B., & La Claire, L. (1993). Contour deletion as a method for identifying weights of features underlying object recognition.
The Quarterly Journal of Experimental Psychology, 46B(1), 43-61.